LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking
3D viewer superposition
Results
| RMSD | Percent of ref match | Percent of molecule match |
|---|---|---|
|
5.15
|
83.33
|
71.43
|
Visualization
| Reference | Molecule |
|
|
|
| Line Number | Reference MTA Elements | X | Y | Z | Molecule DPK Elements | X | Y | Z |
|---|---|---|---|---|---|---|---|---|
| 1 | C | 52.089 | 155.236 | 25.597 | C | 52.211 | 158.763 | 27.978 |
| 2 | C | 52.231 | 154.004 | 26.229 | C | 52.102 | 157.389 | 27.752 |
| 3 | C | 51.676 | 153.845 | 27.584 | C | 53.066 | 156.708 | 26.823 |
| 4 | C | 52.437 | 154.509 | 28.823 | C | 52.438 | 156.19 | 25.528 |
| 5 | C | 51.764 | 155.828 | 29.124 | C | 52.379 | 157.354 | 24.545 |
| 6 | N | 53.837 | 154.546 | 28.739 | N | 53.171 | 155.013 | 25.006 |
| 7 | C | 52.961 | 153.035 | 25.561 | C | 51.115 | 156.66 | 28.413 |
| 8 | C | 53.617 | 153.305 | 24.369 | C | 50.23 | 157.312 | 29.274 |
| 9 | C | 53.571 | 154.587 | 23.883 | C | 50.333 | 158.68 | 29.491 |
| 10 | C | 52.826 | 155.583 | 24.464 | C | 51.333 | 159.413 | 28.854 |