LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking
3D viewer superposition
Results
| RMSD | Percent of ref match | Percent of molecule match |
|---|---|---|
|
2.14
|
54.55
|
27.27
|
Visualization
| Reference | Molecule |
|
|
|
| Line Number | Reference ISN Elements | X | Y | Z | Molecule SAG Elements | X | Y | Z |
|---|---|---|---|---|---|---|---|---|
| 1 | C | 53.47 | 156.703 | 25.523 | C | 52.857 | 157.331 | 27.054 |
| 2 | C | 52.98 | 157.463 | 26.579 | C | 52.415 | 158.377 | 27.882 |
| 3 | C | 52.306 | 156.733 | 27.565 | C | 51.463 | 158.139 | 28.885 |
| 4 | C | 52.14 | 155.337 | 27.494 | C | 50.971 | 156.847 | 29.047 |
| 5 | C | 52.635 | 154.559 | 26.442 | C | 51.417 | 155.807 | 28.228 |
| 6 | C | 53.305 | 155.241 | 25.445 | C | 52.361 | 156.026 | 27.223 |