LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking
3D viewer superposition
Results
| RMSD | Percent of ref match | Percent of molecule match |
|---|---|---|
|
3.36
|
54.55
|
42.86
|
Visualization
| Reference | Molecule |
|
|
|
| Line Number | Reference ISN Elements | X | Y | Z | Molecule DPK Elements | X | Y | Z |
|---|---|---|---|---|---|---|---|---|
| 1 | C | 53.47 | 156.703 | 25.523 | C | 52.211 | 158.763 | 27.978 |
| 2 | C | 52.98 | 157.463 | 26.579 | C | 51.333 | 159.413 | 28.854 |
| 3 | C | 52.306 | 156.733 | 27.565 | C | 50.333 | 158.68 | 29.491 |
| 4 | C | 52.14 | 155.337 | 27.494 | C | 50.23 | 157.312 | 29.274 |
| 5 | C | 52.635 | 154.559 | 26.442 | C | 51.115 | 156.66 | 28.413 |
| 6 | C | 53.305 | 155.241 | 25.445 | C | 52.102 | 157.389 | 27.752 |