LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking
3D viewer superposition
Results
| RMSD | Percent of ref match | Percent of molecule match |
|---|---|---|
|
6.72
|
83.33
|
52.63
|
Visualization
| Reference | Molecule |
|
|
|
| Line Number | Reference MTA Elements | X | Y | Z | Molecule RGZ Elements | X | Y | Z |
|---|---|---|---|---|---|---|---|---|
| 1 | C | 52.089 | 155.236 | 25.597 | C | 51.844 | 159.941 | 29.081 |
| 2 | C | 52.231 | 154.004 | 26.229 | C | 50.582 | 159.722 | 29.642 |
| 3 | C | 51.676 | 153.845 | 27.584 | O | 49.868 | 160.732 | 30.223 |
| 4 | C | 52.437 | 154.509 | 28.823 | C | 50.636 | 161.735 | 30.95 |
| 5 | C | 51.764 | 155.828 | 29.124 | C | 49.737 | 162.806 | 31.587 |
| 6 | C | 52.961 | 153.035 | 25.561 | C | 50.013 | 158.452 | 29.592 |
| 7 | C | 53.617 | 153.305 | 24.369 | C | 50.697 | 157.399 | 28.995 |
| 8 | C | 53.571 | 154.587 | 23.883 | C | 51.954 | 157.612 | 28.437 |
| 9 | C | 52.826 | 155.583 | 24.464 | C | 52.534 | 158.885 | 28.484 |
| 10 | S | 54.681 | 155.092 | 22.531 | C | 52.703 | 156.433 | 27.803 |