LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking
3D viewer superposition
Results
| RMSD | Percent of ref match | Percent of molecule match |
|---|---|---|
|
3.79
|
63.64
|
36.84
|
Visualization
| Reference | Molecule |
|
|
|
| Line Number | Reference ISN Elements | X | Y | Z | Molecule RGZ Elements | X | Y | Z |
|---|---|---|---|---|---|---|---|---|
| 1 | N | 53.868 | 154.739 | 24.327 | S | 53.196 | 157.45 | 25.361 |
| 2 | C | 53.305 | 155.241 | 25.445 | C | 53.845 | 156.122 | 24.459 |
| 3 | C | 53.47 | 156.703 | 25.523 | N | 53.349 | 154.906 | 24.688 |
| 4 | C | 54.22 | 157.058 | 24.321 | C | 52.724 | 154.854 | 25.867 |
| 5 | C | 54.417 | 155.751 | 23.632 | C | 52.283 | 156.231 | 26.358 |
| 6 | O | 55.036 | 155.606 | 22.525 | C | 52.703 | 156.433 | 27.803 |
| 7 | O | 54.614 | 158.221 | 23.942 | O | 52.528 | 153.812 | 26.488 |