LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking

References: 1t4v_reference 2r2m_reference 3ldx_referencia

References with error:

Reference: 1t4v_reference

3ldx_docking

3D viewer superposition

Red: 1t4v_reference.mol | Blue: 3ldx_docking.mol

Results
RMSD Percent of ref match Percent of molecule match
5.28
25.93
23.33

Visualization

Reference Molecule
Line
Number		Reference
1t4v_reference
Elements		XYZMolecule
3ldx_docking
Elements		XYZ
1C16.431-13.48221.642C20.9859-13.781526.2834
2C17.466-12.97320.841C22.1363-14.332425.6871
3C18.75-13.56920.911C22.1321-15.674125.2622
4C18.968-14.62521.74C20.9759-16.462425.4259
5C17.968-15.10922.525C19.8152-15.91726.0178
6C16.701-14.56622.486C19.835-14.572526.4501
7C18.257-16.2723.398C18.5644-16.777226.1838
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