LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking

References: 1t4v_reference 2r2m_reference 3ldx_referencia

References with error:

Reference: 1t4v_reference

2r2m_docking

3D viewer superposition

Red: 1t4v_reference.mol | Blue: 2r2m_docking.mol

Results
RMSD Percent of ref match Percent of molecule match
1.12
25.93
23.33

Visualization

Reference Molecule
Line
Number		Reference
1t4v_reference
Elements		XYZMolecule
2r2m_docking
Elements		XYZ
1Cl20.038-12.98219.978Cl19.7442-12.933419.7773
2C18.75-13.56920.911C19.0028-13.866221.025
3C17.466-12.97320.841C17.6857-13.608321.4823
4C16.431-13.48221.642C17.1742-14.394722.5403
5C16.701-14.56622.486C17.9433-15.42923.1178
6C17.968-15.10922.525C19.235-15.69222.6289
7C18.968-14.62521.74C19.7634-14.899721.597
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