LigRMSD: A web server for automatic structure matching and RMSD calculations among identical and similar compounds in protein-ligand docking

References: 1t4v_reference 2r2m_reference 3ldx_referencia

References with error:

Reference: 3ldx_referencia

1t4v_docking

3D viewer superposition

Red: 3ldx_referencia.mol | Blue: 1t4v_docking.mol

Results
RMSD Percent of ref match Percent of molecule match
5.27
23.33
25.93

Visualization

Reference Molecule
Line
Number		Reference
3ldx_referencia
Elements		XYZMolecule
1t4v_docking
Elements		XYZ
1C18.3963-17.104125.9646C18.192-16.172623.0957
2C19.6276-16.241825.8177C18.1407-14.971722.1943
3C19.6021-14.89726.1724C16.9009-14.334221.9418
4C20.7244-14.105426.0186C16.8257-13.281620.9972
5C21.889-14.644225.5097C17.9778-12.909420.3014
6C21.9297-15.978425.1573C19.2084-13.513420.5542
7C20.8092-16.772625.3117C19.2995-14.555821.4941
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